BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039A05SP1|AL430635
(912 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1461 1413 0.0
3x_Contig18 478 e-135
>3x_Contig1461
Length = 5478
Score = 1413 bits (712), Expect = 0.0
Identities = 854/894 (95%), Gaps = 6/894 (0%)
Strand = Plus / Minus
Query: 1 ggccctatacagcgcggtgacatgggtgtgtgcagcatcgaaagatgctgaaagaacgcc 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 2537 ggccctatacagcgcggtgacatgggtgtgtgcagcatcgaaagatgctgcaaga-cgcc 2479
Query: 61 tgaacagtctcgtcatggacatctagcgattccattggcgagcagtggaggatttggtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2478 tgaacagtctcgtcatggacatctagcgattccattggcgagcagtggaggatttggtgg 2419
Query: 121 attactagccaatggcaatccaaaccaaagaaaccatatttgggggaatgccttacagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2418 attactagccaatggcaatccaaaccaaagaaaccatatttgggggaatgccttacagaa 2359
Query: 181 tagccgggcgactttggttgtctgtgattctgtgagtgtaacct-cctctttggccg-at 238
|||| |||||||||||||||| ||||||| |||||||||||||| |||||||||||| ||
Sbjct: 2358 tagcggggcgactttggttgtttgtgattttgtgagtgtaaccttcctctttggccggat 2299
Query: 239 gatattgaacgtt-ctgtttctgcgaaacatcggagcagtgttcagtggaagtcggttag 297
||||||||||||| |||||| ||||||| || ||||||||||||||||||||| ||||||
Sbjct: 2298 gatattgaacgtttctgtttttgcgaaaaattggagcagtgttcagtggaagttggttag 2239
Query: 298 aggaaactcaaagagtgctatggcatggaggggttgtgatgatttgatagtgtaaaaact 357
|||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 2238 aggaaaattaaagagtgctatggaatggaggggttgtgatgatttgatagtgtaaaaact 2179
Query: 358 gttgaattgttgcttccgacgcgagtctggaaacttgtttccttacttgcatttctaatc 417
||||||||||||||| || |||||| |||||| |||||||||||||||||||| ||||
Sbjct: 2178 gttgaattgttgcttttgaagcgagtatggaaaattgtttccttacttgcatttataata 2119
Query: 418 atgataaaatatctgcgacagttgatgcgggacttgacagcatttgttgttaagacttgt 477
|||||||||||| ||||| ||||||||||||| |||| ||||||||||||||||| ||||
Sbjct: 2118 atgataaaatatatgcgaaagttgatgcgggagttgagagcatttgttgttaagaattgt 2059
Query: 478 ggatactgcttcataagatagttatctggttgatcctgccagtagtcatatgcttgtctc 537
|||||||||||||||||||| |||| ||||||||| ||| |||||| |||||||||| |
Sbjct: 2058 ggatactgcttcataagatatttatttggttgatcttgcgagtagttatatgcttgtata 1999
Query: 538 aaagattaagccatgcatgtctaagtataagcmatttatacagtgaaactgcgaatggct 597
||||||||||| |||||||| ||||||||||| ||||||||||||||| ||||||||| |
Sbjct: 1998 aaagattaagcaatgcatgtataagtataagcaatttatacagtgaaa-tgcgaatgggt 1940
Query: 598 cattaaatcagttatcgtttatttgatagttcctttactacatggatatctgtggtaatt 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1939 cattaaatcagttatcgtttatttgatagttcctttactacatggatatctgtggtaatt 1880
Query: 658 ctagagctaatacatgcttaaaatctcgaccctttggaagagatgtatttattagataaa 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1879 ctagagctaatacatgcttaaaatctcgaccctttggaagagatgtatttattagataaa 1820
Query: 718 aaatcaatgtcttcggactccttgatgattcataataacttttcgaatcgcatggccttg 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1819 aaatcaatgtcttcggactccttgatgattcataataacttttcgaatcgcatggccttg 1760
Query: 778 tgctggcgatggttcattcaaatttctgccctatcaactttcgatggtaggatagtggcc 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1759 tgctggcgatggttcattcaaatttctgccctatcaactttcgatggtaggatagtggcc 1700
Query: 838 taccatggtttcaacgggtaacggggaataaggg-tcgattccggagagggagc 890
|||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1699 taccatggtttcaacgggtaacggggaataagggttcgattccggagagggagc 1646
>3x_Contig18
Length = 1116
Score = 478 bits (241), Expect = e-135
Identities = 248/249 (99%), Gaps = 1/249 (0%)
Strand = Plus / Plus
Query: 574 tatacagtgaaactgcgaatggctcattaaatcagttatcgtttatttgatagttccttt 633
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39 tatacagtgaaa-tgcgaatggctcattaaatcagttatcgtttatttgatagttccttt 97
Query: 634 actacatggatatctgtggtaattctagagctaatacatgcttaaaatctcgaccctttg 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 actacatggatatctgtggtaattctagagctaatacatgcttaaaatctcgaccctttg 157
Query: 694 gaagagatgtatttattagataaaaaatcaatgtcttcggactccttgatgattcataat 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 gaagagatgtatttattagataaaaaatcaatgtcttcggactccttgatgattcataat 217
Query: 754 aacttttcgaatcgcatggccttgtgctggcgatggttcattcaaatttctgccctatca 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 aacttttcgaatcgcatggccttgtgctggcgatggttcattcaaatttctgccctatca 277
Query: 814 actttcgat 822
|||||||||
Sbjct: 278 actttcgat 286
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5573
Number of Sequences: 1807
Number of extensions: 5573
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 2
length of query: 912
length of database: 10,358,551
effective HSP length: 16
effective length of query: 896
effective length of database: 10,329,639
effective search space: 9255356544
effective search space used: 9255356544
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)